Package: SPARSEMODr 1.2.0

Joseph Mihaljevic

SPARSEMODr: SPAtial Resolution-SEnsitive Models of Outbreak Dynamics

Implementation of spatially-explicit, stochastic disease models with customizable time windows that describe how parameter values fluctuate during outbreaks (e.g., in response to public health or conservation interventions).

Authors:Joseph Mihaljevic [aut, cre], Toby Hocking [ctb], Seth Borkovec [ctb], Saikanth Ratnavale [ctb]

SPARSEMODr_1.2.0.tar.gz
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SPARSEMODr.pdf |SPARSEMODr.html✨
SPARSEMODr/json (API)
NEWS

# Install 'SPARSEMODr' in R:
install.packages('SPARSEMODr', repos = c('https://nau-ccl.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/nau-ccl/sparsemodr/issues

Uses libs:
  • gsl– GNU Scientific Library (GSL)
  • c++– GNU Standard C++ Library v3

On CRAN:

4.78 score 8 scripts 239 downloads 5 exports 117 dependencies

Last updated 2 years agofrom:1b27583686. Checks:OK: 1 NOTE: 8. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 26 2024
R-4.5-win-x86_64NOTEOct 26 2024
R-4.5-linux-x86_64NOTEOct 26 2024
R-4.4-win-x86_64NOTEOct 26 2024
R-4.4-mac-x86_64NOTEOct 26 2024
R-4.4-mac-aarch64NOTEOct 26 2024
R-4.3-win-x86_64NOTEOct 26 2024
R-4.3-mac-x86_64NOTEOct 26 2024
R-4.3-mac-aarch64NOTEOct 26 2024

Exports:covid19_controlmodel_interfacemodel_parallelseir_controltime_windows

Dependencies:askpassbackportsbase64encbitbit64blobbroombslibcachemcallrcellrangerclicliprcodetoolscolorspaceconflictedcpp11crayoncurldata.tableDBIdbplyrdigestdplyrdtplyrevaluatefansifarverfastmapfontawesomeforcatsfsfuturefuture.applygarglegenericsgeosphereggplot2globalsgluegoogledrivegooglesheets4gridExtragtablehavenhighrhmshtmltoolshttridsisobandjquerylibjsonliteknitrlabelinglatticelifecyclelistenvlubridatemagrittrMASSMatrixmemoisemgcvmimemodelrmunsellnlmeopensslparallellypillarpkgconfigprettyunitsprocessxprogresspspurrrR6raggrappdirsRColorBrewerRcppreadrreadxlrematchrematch2reprexrlangrmarkdownrstudioapirvestsassscalesselectrspstringistringrsyssystemfontstextshapingtibbletidyrtidyselecttidyversetimechangetinytextzdbutf8uuidvctrsviridisviridisLitevroomwithrxfunxml2yaml

SPARSE-MOD COVID-19 Model

JR Mihaljevic

Rendered fromcovid-19-model.Rmdusingknitr::rmarkdownon Oct 26 2024.

Last update: 2022-07-19
Started: 2020-12-08

SPARSE-MOD COVID-19 Model

JR Mihaljevic

Rendered fromcovid-19-model-vary-hosp.Rmdusingknitr::rmarkdownon Oct 26 2024.

Last update: 2022-07-19
Started: 2020-12-08

SPARSE-MOD Key Features

JR Mihaljevic

Rendered fromkey-features.Rmdusingknitr::rmarkdownon Oct 26 2024.

Last update: 2022-07-19
Started: 2020-12-08

SPARSE-MOD SEIR Model

JR Mihaljevic

Rendered fromseir-model.Rmdusingknitr::rmarkdownon Oct 26 2024.

Last update: 2022-07-19
Started: 2020-12-08