Package: SPARSEMODr 1.2.0
Joseph Mihaljevic
SPARSEMODr: SPAtial Resolution-SEnsitive Models of Outbreak Dynamics
Implementation of spatially-explicit, stochastic disease models with customizable time windows that describe how parameter values fluctuate during outbreaks (e.g., in response to public health or conservation interventions).
Authors:
SPARSEMODr_1.2.0.tar.gz
SPARSEMODr_1.2.0.zip(r-4.5)SPARSEMODr_1.2.0.zip(r-4.4)SPARSEMODr_1.2.0.zip(r-4.3)
SPARSEMODr_1.2.0.tgz(r-4.4-x86_64)SPARSEMODr_1.2.0.tgz(r-4.4-arm64)SPARSEMODr_1.2.0.tgz(r-4.3-x86_64)SPARSEMODr_1.2.0.tgz(r-4.3-arm64)
SPARSEMODr_1.2.0.tar.gz(r-4.5-noble)SPARSEMODr_1.2.0.tar.gz(r-4.4-noble)
SPARSEMODr_1.2.0.tgz(r-4.4-emscripten)SPARSEMODr_1.2.0.tgz(r-4.3-emscripten)
SPARSEMODr.pdf |SPARSEMODr.html✨
SPARSEMODr/json (API)
NEWS
| # Install 'SPARSEMODr' in R: |
| install.packages('SPARSEMODr', repos = c('https://nau-ccl.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/nau-ccl/sparsemodr/issues
Last updated 2 years agofrom:1b27583686. Checks:OK: 1 NOTE: 8. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Sep 13 2024 |
| R-4.5-win-x86_64 | NOTE | Sep 13 2024 |
| R-4.5-linux-x86_64 | NOTE | Sep 13 2024 |
| R-4.4-win-x86_64 | NOTE | Sep 13 2024 |
| R-4.4-mac-x86_64 | NOTE | Sep 13 2024 |
| R-4.4-mac-aarch64 | NOTE | Sep 13 2024 |
| R-4.3-win-x86_64 | NOTE | Sep 13 2024 |
| R-4.3-mac-x86_64 | NOTE | Sep 13 2024 |
| R-4.3-mac-aarch64 | NOTE | Sep 13 2024 |
Exports:covid19_controlmodel_interfacemodel_parallelseir_controltime_windows
Dependencies:askpassbackportsbase64encbitbit64blobbroombslibcachemcallrcellrangerclicliprcodetoolscolorspaceconflictedcpp11crayoncurldata.tableDBIdbplyrdigestdplyrdtplyrevaluatefansifarverfastmapfontawesomeforcatsfsfuturefuture.applygarglegenericsgeosphereggplot2globalsgluegoogledrivegooglesheets4gridExtragtablehavenhighrhmshtmltoolshttridsisobandjquerylibjsonliteknitrlabelinglatticelifecyclelistenvlubridatemagrittrMASSMatrixmemoisemgcvmimemodelrmunsellnlmeopensslparallellypillarpkgconfigprettyunitsprocessxprogresspspurrrR6raggrappdirsRColorBrewerRcppreadrreadxlrematchrematch2reprexrlangrmarkdownrstudioapirvestsassscalesselectrspstringistringrsyssystemfontstextshapingtibbletidyrtidyselecttidyversetimechangetinytextzdbutf8uuidvctrsviridisviridisLitevroomwithrxfunxml2yaml
SPARSE-MOD COVID-19 Model
Rendered fromcovid-19-model.Rmdusingknitr::rmarkdownon Sep 13 2024.Last update: 2022-07-19
Started: 2020-12-08
SPARSE-MOD COVID-19 Model
Rendered fromcovid-19-model-vary-hosp.Rmdusingknitr::rmarkdownon Sep 13 2024.Last update: 2022-07-19
Started: 2020-12-08
SPARSE-MOD Key Features
Rendered fromkey-features.Rmdusingknitr::rmarkdownon Sep 13 2024.Last update: 2022-07-19
Started: 2020-12-08
SPARSE-MOD SEIR Model
Rendered fromseir-model.Rmdusingknitr::rmarkdownon Sep 13 2024.Last update: 2022-07-19
Started: 2020-12-08
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| SPAtial Resolution-SEnsitive Models of Outbreak Dynamics | SPARSEMODr-package SPARSEMODr |
| COVID19 Parameters Control Data Structure | covid19_control |
| Universal Model Interface to the SPARSE-MOD Models | model_interface |
| Parallelized implementation of the SPARSE-MOD models | model_parallel |
| Movement dynamics in SPARSEMODr models. | Movement |
| SEIR Parameters Control Data Structure | seir_control |
| Time Windows Data Structure | time_windows |
